PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS72893.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 146aa    MW: 16296.5 Da    PI: 4.5158
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS72893.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.000272183955
                TCHHHHHHHHHHHHHHH CS
         HLH 39 sKaeiLekAveYIksLq 55
                +Ka+i + A++YI sLq
  EPS72893.1  2 DKASIIKDAINYIESLQ 18
                8***************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.9E-5135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.7E-7135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MDKASIIKDA INYIESLQKE ESRIVSEIEE LEEETGRHDS NSEIDSAGVK AQSPPVSPLQ  60
VVELRGASVG EKTIIVSLTS CSKRREDALI QICHVFELLN LKIITANLTA LRDNLLTTTI  120
FIQGEEEEKD VLLRKIEAAI SEYRKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828748.12e-35PREDICTED: transcription factor bHLH35
TrEMBLS8EAL41e-100S8EAL4_9LAMI; Uncharacterized protein
STRINGVIT_11s0052g00100.t012e-32(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29232451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.17e-24bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]